26#ifndef vtkMoleculeReaderBase_h
27#define vtkMoleculeReaderBase_h
29#include "vtkIOGeometryModule.h"
47 vtkSetStringMacro(FileName);
55 vtkGetMacro(BScale,
double);
63 vtkGetMacro(HBScale,
double);
66 vtkGetMacro(NumberOfAtoms,
int);
object to represent cell connectivity
abstract superclass for arrays of numeric data
dynamic, self-adjusting array of float
dynamic, self-adjusting array of vtkIdType
a simple class to control print indentation
read Molecular Data files
vtkUnsignedCharArray * RGB
vtkUnsignedCharArray * SecondaryStructuresEnd
vtkIdTypeArray * AtomType
virtual int FillOutputPortInformation(int, vtkInformation *)
Fill the output port information objects for this algorithm.
int MakeAtomType(const char *atype)
vtkUnsignedCharArray * IsHetatm
vtkUnsignedCharArray * SecondaryStructuresBegin
vtkStringArray * AtomTypeStrings
virtual void ReadSpecificMolecule(FILE *fp)=0
int ReadMolecule(FILE *fp, vtkPolyData *output)
vtkUnsignedCharArray * Chain
int MakeBonds(vtkPoints *, vtkIdTypeArray *, vtkCellArray *)
void PrintSelf(ostream &os, vtkIndent indent)
Methods invoked by print to print information about the object including superclasses.
virtual int RequestData(vtkInformation *, vtkInformationVector **, vtkInformationVector *)
This is called by the superclass.
vtkUnsignedCharArray * SecondaryStructures
class describing a molecule
represent and manipulate 3D points
Superclass for algorithms that produce only polydata as output.
concrete dataset represents vertices, lines, polygons, and triangle strips
a vtkAbstractArray subclass for strings
dynamic, self-adjusting array of unsigned char
vtkSetMacro(IgnoreDriverBugs, bool)
Updates the extensions string.
vtkGetStringMacro(ExtensionsString)
Returns a string listing all available extensions.